Well it looks like engine miss is resolved. The spark plug wires, cap and rotor seemed to have been the problems.
Engine idle is back to being like it should for a mild roller cam engine. I will continue to monitor this but will now focus on other areas of the car.
There is a vibration I have noticed now that I drive the car more. It feels like its coming from the back. It could be the tires or the driveshaft. I dont think I put the driveshaft back in the same position when I removed it.
I do need new rear tires, so I will get those replaced(they are about 12 years old). The tread is still good on the tires.
